KEGG   Streptococcus pneumoniae R6 (avirulent serotype 2): spr1310
Entry
spr1310           CDS       T00060                                 
Symbol
fms
Name
(GenBank) Peptide deformylase, N-formylmethionylaminoacyl-tRNA deformylase
  KO
K01462  peptide deformylase [EC:3.5.1.88]
Organism
spr  Streptococcus pneumoniae R6 (avirulent serotype 2)
Brite
KEGG Orthology (KO) [BR:spr00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    spr1310 (fms)
Enzymes [BR:spr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.88  peptide deformylase
     spr1310 (fms)
SSDB
Motif
Pfam: Pep_deformylase
Other DBs
NCBI-ProteinID: AAL00114
UniProt: Q8DP79
Structure
Position
1300763..1301374
AA seq 203 aa
MSAIERITKAAHLIDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPV
MAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQ
DAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHING
IMFYDRINEKDPFAVKDGLLILE
NT seq 612 nt   +upstreamnt  +downstreamnt
atgtctgcaatagaacgtattacaaaagctgctcacttaattgatatgaacgatattatc
cgtgaagggaatcctactctacgcacggttgctgaggaagtcactttccccctatctgac
caggaaatcatcctaggcgaaaagatgatgcaattccttaaacattcccaagatcctgtc
atggctgaaaaaatgggactccgcggtggtgttggactggctgctccccagttagatatc
tcaaaacgcattatcgctgttttggtacctaatattgttgaagaaggcgaaactccacag
gaagcctacgatttggaagccattatgtacaatccaaaaatcgtctctcactctgttcaa
gatgctgctcttggcgaaggagaaggttgcctgtctgttgaccgtaacgtgcctggctat
gttgttcgccatgcccgcgttactgttgactactttgacaaagatggagaaaaacaccgt
atcaaactcaaaggctacaactccattgttgttcagcatgaaattgaccacattaacggt
atcatgttttacgatcgcatcaatgaaaaagacccatttgcagttaaagatggtttactg
attcttgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (7)   
   PDB (7)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system